BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A05SP1|AL429147
(651 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1059 652 0.0
3x_Contig973 487 e-137
>3x_Contig1059
Length = 3822
Score = 652 bits (328), Expect = 0.0
Identities = 332/334 (99%)
Strand = Plus / Minus
Query: 318 agtaatcttttcttgcattggttttaagaaatgttttgatctcttgttctcagaaacgtc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3822 agtaatcttttcttgcattggttttaagaaatgttttgatctcttgttctcagaaacgtc 3763
Query: 378 aaactgataattaaagctacatatatatacacacacttgtattagtgatctgatcaagtg 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3762 aaactgataattaaagctacatatatatacacacacttgtattagtgatctgatcaagtg 3703
Query: 438 agccttttttttcattgggacaatcgacaatttgttagggtcttaattaaaaagcctgtg 497
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3702 agctttttttttcattgggacaatcgacaatttgttagggtcttaattaaaaagcctgtg 3643
Query: 498 ttttaacgaagagaaaagaacaaaataaaaagtaaacatgaataactcggtctacggcgt 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3642 ttttaacgaagagaaaagaacaaaataaaaagtaaacatgaataactcggtctacggcgt 3583
Query: 558 tgctttccgttcattgagtaccggtgatgaaaagctgtataaggaagctacgagattcta 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3582 tgctttccgttcattgagtaccggtgatgaaaagctgtataaggaagctacgagattcta 3523
Query: 618 ccattctttgggtttccaaacggtaaaactktac 651
|||||||||||||||||||||||||||||| |||
Sbjct: 3522 ccattctttgggtttccaaacggtaaaactgtac 3489
>3x_Contig973
Length = 4038
Score = 487 bits (245), Expect = e-137
Identities = 251/253 (99%)
Strand = Plus / Plus
Query: 1 gatctcgtaatcttccgtgtatcccacatgtgtaacccgcacgtcagtaagcaacttcca 60
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 3786 gatctcgtaatcttccgtgtatcccacatgtgttacccgcacgtcagttagcaacttcca 3845
Query: 61 ctaaaatcaaacatattcccctttcgaaaatcgtgctgattccattttttttttaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 ctaaaatcaaacatattcccctttcgaaaatcgtgctgattccattttttttttaggaag 3905
Query: 121 ctggtaccaaccatgccataaaaagggagaatcccattagtggaagctctaggctcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3906 ctggtaccaaccatgccataaaaagggagaatcccattagtggaagctctaggctcatca 3965
Query: 181 cgttctttgtttctgcatgcccattatcgcagcaacactcacacaacccttccaacatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 cgttctttgtttctgcatgcccattatcgcagcaacactcacacaacccttccaacatgg 4025
Query: 241 cataattcatata 253
|||||||||||||
Sbjct: 4026 cataattcatata 4038
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6996
Number of Sequences: 1807
Number of extensions: 6996
Number of successful extensions: 150
Number of sequences better than 1.0e-20: 2
length of query: 651
length of database: 10,358,551
effective HSP length: 16
effective length of query: 635
effective length of database: 10,329,639
effective search space: 6559320765
effective search space used: 6559320765
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)